Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904304.1_cds_XP_016454458.1_48484
CDS Infomation

[gene=LOC107778683] [db_xref=GeneID:107778683] [protein=protein GAMETE EXPRESSED 3-like isoform X2] [protein_id=XP_016454458.1] [location=join(9670..9775,10611..10798,12060..12383,12659..12869,13065..13349,13466..13552,13887..13919,14001..14060,14136..14278,14839..15441)] [gbkey=CDS]
Sequence

ATGATATTCATGTCTCCACGAATTGAAGTTGCAGTTGCTTTGATCTTGTCCCTGCTTTTA
CTATCAGCATCTGTTGTGTCCTTCGCATATTCCCACACGTTTTCAGGTCAAGAATCTTTC
AAGAAAGCTGCATATAGGCTCAGCAAGCCGCTGATCAGTGATGATGGGAAGGTTTATGTG
TGTTCAGAAAAGAACTTTTTTGCCTTTGAAAGCAATGGTTCCATCGCGTGGACGTTATCT
CTCAATTACAAATGCAGCCCTAATATAGCTCCAGTTCTAGGGGAATCAAGAAAGATATAT
GTGGTTGCAGAAGACAGAGTGCTGAAGATCAACCCTTTGAATGTTGGAAGTTCTGAAACA
GCTGTAGAATTGTTCTTTGGTACAGAATCTGAAAGACCGGGGGAGATTATTGGCCTTGCA
GTAAGTATGTCCACTTCCAGTGTACTTATCAATGTCAAAAACAGGGGTCTCTTTTCATAC
CGTTTGCATGGAAAACTGCACTGGAGTGCTGGCCCGGTACTTTATCAACGTGGATATCGT
CAAGGTTGTAGGAAAAACATCACTGAGTGTTATTTTTCCACGGTTCCTGTGTTCGATCAC
TGTGAAGCTAGTATATATATCTCAAATAATCAAGGAGAAATTTATGCTCTGTCAACTCGT
AGTCCACATTTCAAATGGATCCAAGATTTCAGTTCATTTGGCAATACACTGACCATGACA
TCCGGCAATAATGGTCTGTTGTATGTTACTGTAGCACCTAGAGCTCTGGTACTAGCAGTT
GATGTTTCCAGGGGAAGCATTTTGTGGCAAACAAGTATTGGACCGCTAAGTTGGATATCT
ATTGGTTCATTGGACGGTTACCTCTATTCATTTTCGCCAGAAGGAGTTCTCAGAAAATTG
CCTAAAGTGCTTAACATGGATTCTGTAATCCAAGTTAGTCCTGTTCTTGATTGCTCAGGA
TATGCAATCTATGTTTCTCAGACAGAGATCGAAGGAAAGATTACTCGGATAATTGGAGAT
TACACTTACATCTCAGCGATGAAACCAATGGGCGTTATCTTCACACTGATTAGTCCAGCT
ACTGGGACCATATTTTGGTCTGAACAATATCCTGGCCAATTCTCCTCGGAGTTTTTGAGA
AGTGACCTGCAATATTTTCTTCTGGATGAAAGTGTCCTCCTTGCTTTTTTTGCAGCTTCA
AGTATTGGGAATCCGCTACCATGTCGAAGCTCACGTCAGAAGTTTGCATTAAGCTGCTCA
CAGATTAAGCCTAAGAATTTCAGCATCTACATAGGTAATAAGAAGACAATTTTGCTGTTT
CTGATCTTGGAATCTATCATATTGATAGTACTAGCAGTACTAGTAAGATTTTGCTGCATG
TTTTGGAAGAAAAAGAAGCTTCAAAATCAAGATCTTGGGAAATTCTTAGATAAAAGACGA
TCACTTCGACTTCAGAAGAAAGCTTTTGATAGATCAATCACAGAGCTTCAACAAAAGACC
GCTGAGGAAGCAATAGCCAATGAGGTGCTGGAAAAGCTAGGCAATCTAGTTAAGGAAAGG
GAAGGCATACAGAGGAAGCTCTCAACATCATATAGTCTAGGAAGGGACCAAACTGGTTCT
CATTCAACATCCCTTCTTCCATTGTCCGATAGGAAAATACGGAGCTTTTCATTTCAAGGC
GCGAAGAAAGAGAGTGTTACTTTGTTTCATACAGTTAGTGATACTTCTTCTGAAACTAGC
TGGAGTGAGAGGGAGCACTCCGACATGCATATCTCTGAAGATGAAGAGGAAACAGACGAT
GCAAAGTCACCTACAGAAATATTTAGTTCTAGTGATAATGAGATTTACAAGGAAGAATTT
CATGCTAGTCCATCTTGCTTAGCTTCCAGTTCGAAAGTGTTTACGAATACATCAATCCTG
GAACAACTGGTTGATGAAATAGAGGAAATGAAGCCGAGTGATCAAAAGGACTCCATCAAT
CATCCCCTGCAGAACCGCAGCATAAGCATAAGGAAGAGGAATTCATATTCAAGTAGCTAG

Peptide Sequence

PEP ID

XP_016454458.1
PEP Infomation

PREDICTED: protein GAMETE EXPRESSED 3-like isoform X2 [Nicotiana tabacum]
Sequence

MIFMSPRIEVAVALILSLLLLSASVVSFAYSHTFSGQESFKKAAYRLSKPLISDDGKVYV
CSEKNFFAFESNGSIAWTLSLNYKCSPNIAPVLGESRKIYVVAEDRVLKINPLNVGSSET
AVELFFGTESERPGEIIGLAVSMSTSSVLINVKNRGLFSYRLHGKLHWSAGPVLYQRGYR
QGCRKNITECYFSTVPVFDHCEASIYISNNQGEIYALSTRSPHFKWIQDFSSFGNTLTMT
SGNNGLLYVTVAPRALVLAVDVSRGSILWQTSIGPLSWISIGSLDGYLYSFSPEGVLRKL
PKVLNMDSVIQVSPVLDCSGYAIYVSQTEIEGKITRIIGDYTYISAMKPMGVIFTLISPA
TGTIFWSEQYPGQFSSEFLRSDLQYFLLDESVLLAFFAASSIGNPLPCRSSRQKFALSCS
QIKPKNFSIYIGNKKTILLFLILESIILIVLAVLVRFCCMFWKKKKLQNQDLGKFLDKRR
SLRLQKKAFDRSITELQQKTAEEAIANEVLEKLGNLVKEREGIQRKLSTSYSLGRDQTGS
HSTSLLPLSDRKIRSFSFQGAKKESVTLFHTVSDTSSETSWSEREHSDMHISEDEEETDD
AKSPTEIFSSSDNEIYKEEFHASPSCLASSSKVFTNTSILEQLVDEIEEMKPSDQKDSIN
HPLQNRSISIRKRNSYSSS

Transcript Sequence

Gene sequence data has not been registered.